Summary

NP_015396.1

Homolog: NP_593198.1.
Wiesman et al.[1]:

Statistics

Total Homologs: 28
Non significant structural homologs: 1
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists

Structures and Sequence Alignment

The best structural homolog was NP_593198.1 (NP_593198.1 protein meu31 [Schizosaccharomyces pombe]) with a FATCAT [2] P-Value: 6.25e-06 and RMSD of 2.64 angstrom. The sequence alignment identity is 18.5%.
Structural alignment shown in left. Query protein NP_015396.1 colored as red in alignment, homolog NP_593198.1 colored as blue. Query protein NP_015396.1 is also shown in right top, homolog NP_593198.1 showed in right bottom. They are colored based on secondary structures. 

  NP_015396.1 MQNGTEDKSNIPARSNDDVLPPLAVRLTMKVMRLIF-IGKMFAYS--FVPFPPFKLLTFDNTVG--WFVAYSAI-----VSIWG-----------FAVWM 79
  NP_593198.1 -------------------------------MSCISEIGK-FVKSIEYIKLP--CLFIFAAIVGMNLSLLYCLLKGWKNVMIWGIETMLFGAIGIFFAWK 66

  NP_015396.1 ER-GYRHKINLL-------PPRCTKIR-CS----------RC---NTR--IR-SPNWFKYKNWLYFFLLYVSLTTSNL--IIQLASFMTEMSRRGISV-P 151
  NP_593198.1 KKLSWEH-LVLLWSTIDAFFSMC--LRSCTIIYFSMNPYMLCEILNARNVISCSLNTQK-----FFFII---VAASNVYSIFQLCGCLL-MFNNIISIRP 154

  NP_015396.1 G--TKDPG-KRDYL--GLI------IPMRFIGAFIHYMTANLFKEYYLHNGPLEKNDRPSTDEKTSENETL 211
  NP_593198.1 SERT-EPEFNFD-LEKGVAFASDSEFPEKSICI-------------------------------------- 185

Homologs