Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 3. B was
F2Z398
(LMO7 downstream neighbor protein) with a FATCAT P-Value: 0.0419 and RMSD of 1.47 angstrom. The sequence alignment identity is 26.1%.
Structural alignment shown in left. Query protein Q96MD7 colored as red in alignment, homolog F2Z398 colored as blue.
Query protein Q96MD7 is also shown in right top, homolog F2Z398 showed in right bottom. They are colored based on secondary structures.
Q96MD7 MSSQKGNVARSRPQKHQNTFSFKNDKFDKSVQTKKINAKLHDGVCQRCKEVLEWRVKYSKYKPLSKPKKCVKCLQKTVKDSYH----IMCRPCACELEV- 95 F2Z398 -----------------MTW------LDKGVWTQ------ED--ENSC------SFSESDF-P-----GCRDQINPSIPSIWTAVSGMMIS-----LEVR 52 Q96MD7 -CAKCGKKEDIVIPWSL--PLLPRLECSGRILAHHNLRLP-CSSDSPASASRVAGTTGAHHHAQLIFVFLVEMGFHYVGQAGLELLTS 179 F2Z398 WWIK-G-KQGYVI--SLGHALSPRLECSGTFSAHCILGLPGGSSYPPASVSQVVGTTA---------LYLVEEAW---AEAG-KMRS- 122
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.