Results | PROST

Summary

Q902F8

Homolog: P61565.
Function: Endogenous retrovirus group K member 21 Env polyprotein.

Statistics

Total GO Annotation: 56
Unique PROST Go: 35
Unique BLAST Go: 12

Total Homologs: 453
Unique PROST Homologs: 423
Unique BLAST Homologs: 15

Structures and Sequence Alignment

The best structural homolog that predicted by 1. PB was P61565 (Endogenous retrovirus group K member 21 Env polyprotein) with a FATCAT P-Value: 0.0 and RMSD of 4.03 angstrom. The sequence alignment identity is 97.7%.
Structural alignment shown in left. Query protein Q902F8 colored as red in alignment, homolog P61565 colored as blue. Query protein Q902F8 is also shown in right top, homolog P61565 showed in right bottom. They are colored based on secondary structures.

  Q902F8 MNPSEMQRKAPPRRRRHRNRAPLTHKMNKMVTSEEQMKLPSTKKAEPPTWAQLKKLTQLATKYLENTKVTQTPESMLLAALMIVSMVVSLPMPAGAAVAN 100
  P61565 MHPSEMQRKAPPRRRRHRNRAPLTHKMNKMVTS-EQMKLPSTKKAEPPTWAQLKKLTQLATKYLENTKVTQTPESMLLAALMIVSMVVSLPMPAGAAAAN 99

  Q902F8 YTNWAYVPFPPLIRAVTWMDNPIEVYVNDSVWVPGPIDDRCPAKPEEEGMMINISIGYRYPPICLGRAPGCLMPAVQNWLVEVPTVSPISRFTYHMVSGM 200
  P61565 YTNWAYVPFPPLIRAVTWMDNPIEVYVNDSVWVHGPIDDRCPAKPEEEGMMINISIGYHYPPICLGRAPGCLMPAVQNWLVEVPTVSPISRFTYNMVSGM 199

  Q902F8 SLRPRVNYLQDFSYQRSLKFRPKGKPCPKEIPKESKNTEVLVWEECVANSAVILQNNEFGTIIDWAPRGQFYHNCSGQTQSCPSAQVSPAVDSDLTESLD 300
  P61565 SLRPRVNYLQDFSYQRSLKFRPKGKPCPKEIPKESKNTEVLVWEECVANSVVILQNNEFGTIIDWAPRGQFYHNCSGQTQSCPSAQVSPAVDSDLTESLD 299

  Q902F8 KHKHKKLQSFYPWEWGEKRISTPRPKIVSPVSGPEHPELWRLTVASHHIRIWSGNQTLETRDRKPFYTVDLNSSLTLPLQSCVKPPYMLVVGNIVIKPDS 400
  P61565 KHKHKKLQSFYPWEWGEKGISTPRPKIISPVSGPEHPELWRLTVASHHIRIWSGNQTLETRDRKPFYTVDLNSSLTVPLQSCVKPPYMLVVGNIVIKPDS 399

  Q902F8 QTITCENCRLLTCIDSTFNWQHRILLVRAREGVWIPVSMDRPWEASPSVHILTEVLKGVLNRSKRFIFTLIAVIMGLIAVTATAAVAGVALHSSVQSVNF 500
  P61565 QTITCENCRLLTCIDSTFNWQHRILLVRAREGVWIPVSMDRPWEASPSIHILTEVLKGVLNRSKRFIFTLIAVIMGLIAVTAMAAVAGVALHSFVQSVNF 499

  Q902F8 VNDGQKNSTRLWNSQSSIDQKLANQINDLRQTVIWMGDRLMSLEHRFQLQCDWNTSDFCITPQIYNDSEHHWDMVRRHLQGREDNLTLDISKLKEQIFEA 600
  P61565 VNDWQKNSTRLWNSQSSIDQKLANQINDLRQTVIWMGDRLMSLEHRFQLQCDWNTSDFCITPQIYNESEHHWDMVRRHLQGREDNLTLDISKLKEQIFEA 599

  Q902F8 SKAHLNLVPGTEAIAGVADGLANLNPVTWVKTIGSTTIINLILILVCLFCLLLVCRCTQQLRRDSDHRERAMMTMAVLSKRKGGNVGKSKRDQIVTVSV 699
  P61565 SKAHLNLVPGTEAIAGVADGLANLNPVTWVKTIGSTTIINLILILVCLFCLLLVCRCTQQLRRDSDHRERAMMTMVVLSKRKGGNVGKSKRDQIVTVSV 698

Go Annotations

1. PB indicates the go terms that are found by both PROST and BLAST.
2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.

Show entries

Search:

Source	GO	Description
1. PB	GO:0005198	structural molecule activity
1. PB	GO:0019064	fusion of virus membrane with host plasma membrane
1. PB	GO:0005886	plasma membrane
1. PB	GO:0019031	viral envelope
1. PB	GO:0019062	virion attachment to host cell
1. PB	GO:0016021	integral component of membrane
1. PB	GO:0098670	entry receptor-mediated virion attachment to host cell
1. PB	GO:0055036	virion membrane
1. PB	GO:0020002	host cell plasma membrane
2. P	GO:0039663	membrane fusion involved in viral entry into host cell

Showing 1 to 10 of 56 entries

Homologs

1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.

Show entries

Search:

Source	Homolog	Description	FATCAT p-val	PROST Evalue	BLAST Evalue
1. PB	O71037	Endogenous retrovirus group K member 19 Env polyprotein	0.00e+00	2.73e-112	0.0
1. PB	Q85646	Envelope glycoprotein gp70	NA	2.96e-51	2.03e-32
1. PB	Q902F8	Endogenous retrovirus group K member 8 Env polyprotein	0	3.95e-146	0.0
1. PB	P03374	Envelope glycoprotein gp70	NA	1.90e-54	3.19e-33
1. PB	P61566	Endogenous retrovirus group K member 24 Env polyprotein	3.08e-14	2.88e-20	0.0
1. PB	Q69384	Endogenous retrovirus group K member 6 Env polyprotein	0.00e+00	7.82e-118	0.0
1. PB	P61565	Endogenous retrovirus group K member 21 Env polyprotein	0.00e+00	4.05e-102	0.0
1. PB	Q902F9	Endogenous retrovirus group K member 113 Env polyprotein	0.00e+00	4.39e-112	0.0
1. PB	P31621	Envelope glycoprotein	NA	2.85e-44	8.94e-36
1. PB	P10259	Envelope glycoprotein gp70	NA	2.32e-54	2.18e-33

Showing 1 to 10 of 453 entries