Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 3. B was
Q63518
(Myosin-binding protein C, slow-type (Fragment)) with a FATCAT P-Value: 3.99e-11 and RMSD of 2.84 angstrom. The sequence alignment identity is 14.8%.
Structural alignment shown in left. Query protein Q8N9C0 colored as red in alignment, homolog Q63518 colored as blue.
Query protein Q8N9C0 is also shown in right top, homolog Q63518 showed in right bottom. They are colored based on secondary structures.
Q8N9C0 MTTIHSRQMLQEHVSMEFSSSTTHVQTFSQTTKIVGEEVVRRKSSSIVEFFSLVTRSSNIPAGDSVPEFVEKPQPVTAPEGDKAVFRARVQGNAKPHISW 100 Q63518 ---------------------------------------------------------------------------------------------------- 0 Q8N9C0 KRESGIPIKESAKIFYDSINKEHVLKLEPLTSDDSDNYKCIASNDHADAIYTVSLLVTEGQEKMDFKKMLKKRAPPAPKKKQKKVANEKEMLEILSKVPK 200 Q63518 ---------------------------------------------------------------------------------------------------- 0 Q8N9C0 KDFEKVCMEYGFTDFRGLLRKLKEMKKKVEVEAIRILKPLEDKETKVDTTVVFDCIMELKDPNVKMIWIKGTEPLRIQYSLGKYDVKQMGTKYMLVISNV 300 Q63518 ---------------------------------------------------------------------------------------------------- 0 Q8N9C0 NMNDAGIYSLSVGDKRMSAELTVLDEPLKFLGEMKPVKVTERQTAVFEIRLSKKEPNFVWKFNGKELKRDDKYEITVSEDGLTHTLKIKDARLSDSGEFS 400 Q63518 ---------------------------------------------------------------------------------------------------- 0 Q8N9C0 AEAGNLVQKAQLTVDRIPIKFVSNLKNVRVKERSRACLECELTSKDVTLRWKKDGQLLMHGTK--YSMNHEGKRAELIIEDAQLSDGGEYTVVAMQDGDP 498 Q63518 -------------------------------------------------------EEIVPGPKSRYRIKVEGKKHTLIIEGATKADSAEYSV--MTTGG- 42 Q8N9C0 TEYYSTAIVTVEERLATVKSGMSDVHAATGSPAELCVVLN-DEKVEGVWLKDGKEITDLP---G--MQIVKQGAVHKLIFPSMGPEHEGKYTFRAKGTES 592 Q63518 ---QSSAKLSVDLRPLKITTPLTDQTVKLGK--EVCLKCEISENVPGKWTKNG-----LPVQEGERLKVVHKGRIHKLVIANALIEDEGEYVF----TPD 128 Q8N9C0 EASV------FIADPPTIDPSVLEALAA-HAITVKVGHTAHIKVPFRGKPLPKVTWYK-DG--MEVTEEERVSMERGEDQALLTISNCVREDSGLILLKL 682 Q63518 AITVPLVCQIHVIDPPKI---ILDGLEADNTVTVIAGSKLRLEIPVTGEPPPKAIWSRADKAIMEGS--GRIRAESYPDSSTLVIDVAERDDSGVYNINL 223 Q8N9C0 KNDHGSATAT--LHL--S-VLEPPGFASQPQVTDVTKEAVTITWNAPTQDGGAPVLGYIVERRKKGSNLWVPVNKDPIQGTKC---TVD--GLLEDTEYE 772 Q63518 KNEAGEAHASIKLRLWISLILR---LA--PNVTEVGDDWCIMNWEPPVYDGGSPILGYFIERKKKQSSRWMRLNFD-L----CKETTFEPKKMIEGVAYE 313 Q8N9C0 FRVIAVNKAGPGQPSVPSSSVVAKDPV---KPPGLVQDLHVSDS-SNSSISLAWREP----AEGDPPSGYILEM----------------RAED--TKEW 846 Q63518 VRIFAVNAIGISKPSMPSKPFV---PLAVTSPPTL---LAV-DSVTDSSVTMKWRPPDQIGAAG--LSGYVLEYCFEGSTSAKQSNENGEAANDLPAEDW 404 Q8N9C0 SKCTKIPISGTC---YTVGGL-IERQKYFFRIRAVNEAGVGE------PVELDKGVRAMPP----PG-LTTT---------------------------- 903 Q63518 SLQTQ---TGSTRPKFTITGLPTD-AKIFVRVKAINAAGASETKYYSQPI-LVKEI-IEPPKIRIPRHLKQTYIRRVGEAVNLVIPFQGKPRPELTWKKD 498 Q8N9C0 ---------------------------------------------------------------------------------------------------- 903 Q63518 GAEIDKNQINIRNSETDTIIFIRKAERSHSGKYDLEVKVDKYVENASIDIQIVDRPGPPQAVTIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSM 598 Q8N9C0 ----------------------- 903 Q63518 EWFAVIEHYHRTNATITELVIGN 621
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
1. PB | GO:0060168 | positive regulation of adenosine receptor signaling pathway |
1. PB | GO:0006942 | regulation of striated muscle contraction |
1. PB | GO:0021682 | nerve maturation |
1. PB | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules |
1. PB | GO:0021549 | cerebellum development |
1. PB | GO:0045121 | membrane raft |
1. PB | GO:0007399 | nervous system development |
1. PB | GO:0008307 | structural constituent of muscle |
1. PB | GO:0030424 | axon |
1. PB | GO:0007409 | axonogenesis |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | P97527 | Contactin-5 | 2.26e-04 | 9.05e-06 | 9.91e-14 |
1. PB | Q61330 | Contactin-2 | 2.05e-05 | 2.28e-03 | 5.10e-07 |
1. PB | Q07409 | Contactin-3 | 1.19e-07 | 2.18e-02 | 8.14e-11 |
1. PB | P28685 | Contactin-2 | 1.25e-06 | 5.49e-03 | 4.92e-10 |
1. PB | Q9VN14 | Contactin | 3.41e-03 | 8.24e-09 | 3.57e-05 |
1. PB | Q7ZW34 | Contactin-5 | 4.76e-04 | 3.65e-04 | 2.67e-17 |
1. PB | Q69Z26 | Contactin-4 | 4.28e-07 | 1.28e-04 | 4.20e-12 |
1. PB | Q12860 | Contactin-1 | 5.54e-05 | 3.82e-04 | 3.94e-14 |
1. PB | Q62845 | Contactin-4 | 1.04e-06 | 4.14e-04 | 1.12e-11 |
1. PB | Q02246 | Contactin-2 | 1.59e-05 | 2.51e-02 | 1.47e-05 |